Having gone through the 2000 CD and the vinyl copy, I have to say that my preference is for the vinyl version. I think it has a warmer feel, plus I prefer the "over the top" production to the slightly more "naked" feel of the 2000 CD.
I have to say though that I hate the colorized front cover on the CD; that should have been left alone. And I wasn't crazy about the re-touched cover on the inside either at first, but it's growing on me. At least George was trying to make a point with it.